Yes. HPV vaccination is strongly recommended for boys and girls. Vaccination helps protect boys from getting infected with the most common types of HPV that can cause cancers of the throat, penis, and anus.3
Sources:
3 What parents should know about HPV vaccine safety and effectiveness. Centers for Disease Control and Prevention.
https://www.cdc.gov/vaccines/partners/downloads/teens/vaccine-safety.pdf. Published April 22, 2016. Accessed April 4, 2018.